Keyword Search
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CC = Baltimore Convention Center, H = Hilton Baltimore
* = applied session ! = JSM meeting theme
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Keyword Search Criteria: rna returned 76 record(s)
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Sunday, 07/30/2017
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Detecting Differential Gene Expression by Single-Cell RNA Sequencing
Mingyao R Li, University of Pennsylvania; Cheng Jia, University of Pennsylvania; Nancy Ruonan Zhang, Wharton School , University of Pennsylvania
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Sufficient Markov Decision Processes with Alternating Deep Neural Networks
Longshaokan Wang, North Carolina State University; Eric Laber, North Carolina State University; Katie Witkiewitz, University of New Mexico
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Improving the External Validity of Nonprobability Samples
Mansour Fahimi, GfK
3:05 PM
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On a Time Reversal Approach for Testing a Poisson Intensity Against Smooth and Rough Alternatives
Moinak Bhaduri, University of Nevada, Las Vegas
3:20 PM
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Addressing Between-Study Heterogeneity and Cross Platform Data Integration for Gene Signature Selection and Clinical Prediction
Naim Rashid, University of North Carolina at Chapel Hill; Quefeng Li, The University of North Carolina at Chapel Hill; Joseph G Ibrahim, UNC
3:20 PM
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A Bayesian Approach for Correcting Exposure Misclassification in Meta-Analysis
Qinshu Lian, University of Minnesota-Twin cities; Haitao Chu, University of Minnesota
4:20 PM
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Testing Independence Between Two Categorical Variables
Kenneth Liu, Merck & Co.
5:05 PM
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Combining Clinical and Nonclinical Big Data from Multiple Sources
Javier Cabrera, Rutgers University; Birol Emir, Pfizer Inc; Demissie Alemayehu, Pfizer Inc
5:25 PM
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Monday, 07/31/2017
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Evolution of Public Sector Data Collections: Going Beyond Traditional Probability Sample Based Data Collection
Donsig Jang, NORC at the University of Chicago
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Two-Stage Design for Phase II Cancer Clinical Trials with Multiple Endpoints
Hui Gu, Rutgers University; Yong Lin, Rutgers; Weichung Joe Shih, Rutgers School of Public Health; Yaqun Wang, Rutgers; Kejian Liu, Celgene
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Ordinal Logistic Regression Model for the Masters Golf Tournament
Erik Heiny, Utah Valley University; Cody Frisby, Utah Valley University
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Differential Network Analysis Based on Next Generation Sequencing Data
Tyler Grimes, University of Florida; Somnath Datta, University of Florida
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Biomarker Detection and Categorization in RNA-Seq Meta-Analysis Using Bayesian Hierarchical Model
Tianzhou Ma, Department of Biostatistics, University of Pittsburgh; Faming Liang, University of Florida; George Tseng, University of Pittsburgh
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High-Dimensional Mediation Analysis of the Effect of Varenicline on Alcohol Consumption in Mice
John J. Dziak, Penn State University; Arielle Deutsch, Penn State University; Runze Li, The Pennsylvania State University; Helen M. Kamens, Penn State University
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Biomarker Detection and Categorization in RNA-Seq Meta-Analysis Using Bayesian Hierarchical Model
Tianzhou Ma, Department of Biostatistics, University of Pittsburgh; Faming Liang, University of Florida; George Tseng, University of Pittsburgh
8:40 AM
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Data-Driven Penalization for High-Dimensional Regression and Classification Using External Covariates
Britta Velten, EMBL Heidelberg; Wolfgang Huber, EMBL Heidelberg
9:15 AM
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Empirical Bayes Learning from Co-Data in High-Dimensional Prediction Settings
Mark Van De Wiel, VU University medical center
9:35 AM
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There Has to Be an Easier Way: a Simple Alternative for Parameter Tuning of Supervised Learning Methods
Jill Lundell
10:35 AM
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High-Dimensional Mediation Analysis of the Effect of Varenicline on Alcohol Consumption in Mice
John J. Dziak, Penn State University; Arielle Deutsch, Penn State University; Runze Li, The Pennsylvania State University; Helen M. Kamens, Penn State University
11:05 AM
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Refining an External-Factor Model of Government Survey Refusal Rates
Luke Larsen, U.S. Census Bureau; Joanna Lineback, U.S. Census Bureau; Benjamin Reist, U.S. Census Bureau
11:05 AM
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An Alternative Method for Measuring Willingness-To-Pay Using Truncated Distributions of Heterogeneity
Adam Smith, The Ohio State University; Dong Soo Kim, The Ohio State University; Mingyu Joo, The Ohio State University
11:35 AM
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Statistical Compression of Wind Speed Data
Felipe Tagle, Newcastle University; Stefano Castruccio, Newcastle University; Marc G. Genton, KAUST; Paola Crippa, Newcastle University
11:35 AM
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All Our Kin? Measuring Poverty Using Alternative Family Configurations
Trudi Jane Renwick, U.S. Census Bureau; Laryssa Mykyta, University of Texas - Rio Grande Valley; Ashley Edwards, U.S. Census Bureau
11:50 AM
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Expression Recovery in Single Cell RNA Sequencing
Mo R Huang, University of Pennsylvania; Mingyao R Li, University of Pennsylvania; Nancy Ruonan Zhang, Wharton School , University of Pennsylvania
11:50 AM
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A Consulting Dish Cooked Three Ways: Contrasting Approaches for Dealing with Internal, External, and Academic Consulting Clients
Nikola Andric, Deloitte Consulting LLP
2:05 PM
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Assessing Research Outcomes, Impact, and Innovativeness Through Senior Scientist Review: An Alternative Approach to Bibliometrics
Kassie Fronczyk, Institute for Defense Analyses; Justin Mary, Institute for Defense Analyses
2:05 PM
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From Research to Action: The Use of Statistics and Impact Evaluations to Combat Child Labor and Forced Labor Internationally
Kevin Hong, US Department of Labor; Charita Castro, US Department of Labor; Tina Faulkner, US Department of Labor; Carolyn Huang, US Department of Labor; Furio Rosati, Understanding Children's Work Project; Lorenzo Guarcello, Understanding Children's Work Project; Federico Blanco, International Labor Organization; Michaëlle de Cock, International Labour Organization
2:05 PM
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METHODOLOGICAL CHALLENGES in the ANALYSIS of LONGITUDINAL RNASEQ DATA
Roula Tsonaka, Leiden University MC
2:20 PM
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Alternative Methods to Estimate Pooled Effect Size and Its Uncertainty in Meta-Analysis
Alok Dwivedi, Texas Tech University Health Sciences Center El Paso; Mona Pathak, All India Institute of Medical Sciences; Sada Nand Dwivedi, All India Institute of Medical Sciences; Rakesh Shukla, University of Cincinnati
2:50 PM
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Using a 'Flipped Classroom' Approach to Teach Applied Statistics to Nutrition and Biotechnology Students Using Blackboard Learn (TM) and R
John Dawson, Texas Tech University
2:50 PM
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The Recipe and Execution of the Dish from the Side of Internal Statistical Consultant
Todd Sanger, Eli Lilly and Company
3:05 PM
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Sampling Late Baby Boomers: Increasing Cluster- and Household-Level Eligibility Rates with External Data
Daniel Guzman, University of Michigan; Richard Valliant, University of Maryland; Sunghee Lee, University of Michigan; Paul Burton, University of Michigan
3:05 PM
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Maximum Likelihood Versus Alternative Regularized Estimators for Logistic Regression Models
Gabriel Ruiz, Department of Statistics, University of California, Riverside; Subir Ghosh, Department of Statistics, University of California, Riverside
3:20 PM
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Alternative Methods for Selecting Households for Administrative Record Enumeration in Place of Nonresponse Follow-Up for the 2020 Census
Richard Griffin, U.S. Census Bureau
3:25 PM
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Tuesday, 08/01/2017
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PAIRADISE: Paired Analysis of Differential Isoform Expression from Replicate RNA-Seq Data
Levon Demirdjian, University of California Los Angeles; Shihao Shen, University of California Los Angeles; Ying Nian Wu, University of California Los Angeles; Yi Xing, University of California Los Angeles
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An Empirical Bayes Approach for Differential Expression Analysis of RNA-Seq Data
Anqi Zhu; Michael Love, University of North Carolina Chapel Hill; Joseph G Ibrahim, UNC
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A Bayesian Approach to Analyzing Gene Expression in Heterogeneous Tissue Samples
Megan Stefanski, University of Missouri - Kansas City; David Spade, University of Missouri - Kansas City
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Slingshot: Cell Lineage and Pseudotime Inference for Single-Cell Transcriptomics
Kelly Street, Univ of California - Berkeley; David Risso, Department of Healthcare Policy and Research, Weill Cornell Medicine; Russell B. Fletcher, Department of Molecular and Cell Biology, UC Berkeley; Diya Das, Department of Molecular and Cell Biology, UC Berkeley; John Ngai, Department of Molecular and Cell Biology & Helen Wills Nenuroscience Institute, UC Berkeley; Nir Yosef, Department of Electrical Engineering and Computer Sciences, UC Berkeley; Elizabeth Purdom, Department of Statistics, UC Berkeley; Center for Computational Biology, UC Berkeley; Sandrine Dudoit, Division of Biostatistics, School of Public Health, UC Berkeley; Department of Statistics
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Coefficient Estimation and Hypothesis Testing on Interval-Valued Data Regression by Measurement Error
Yaotong Cai, University of Georgia; lynne Billard, University of Georgia
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Using an Alternative Sequence for Teaching an Undergraduate Introductory Statistics
Phyllis Curtiss, Grand Valley State University; Robert Pearson, Grand Valley State University
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Reflections and Faculty Feedback on an Alternative Sequence for Teaching an Undergraduate Introductory Statistics Course
Robert Pearson, Grand Valley State University; Phyllis Curtiss, Grand Valley State University
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A Permutation-Based Non-Parametric Analysis of CRISPR Screen Data
Gaoxiang Jia, Southern Methodist University & UT Southwestern Medical Center; Xinlei Wang, Southern Methodist University; Guanghua Xiao, UT Southwestern Medical Center
10:35 AM
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Using an Alternative Sequence for Teaching an Undergraduate Introductory Statistics
Phyllis Curtiss, Grand Valley State University; Robert Pearson, Grand Valley State University
10:50 AM
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Coefficient Estimation and Hypothesis Testing on Interval-Valued Data Regression by Measurement Error
Yaotong Cai, University of Georgia; lynne Billard, University of Georgia
10:55 AM
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Reflections and Faculty Feedback on an Alternative Sequence for Teaching an Undergraduate Introductory Statistics Course
Robert Pearson, Grand Valley State University; Phyllis Curtiss, Grand Valley State University
10:55 AM
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Gene Expression Variability and the Analysis of Large-Scale RNA-Seq Studies with the MDSeq
Z. John Daye, None; Di Ran, University of Arizona
11:20 AM
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Assessment of RNA-Seq Differential Expression Methods Based on TCGA Data
Guy Brock, Center for Biostatistics, The Ohio State University College of Medicine; Meredith McCormack-Mager, Center for Biostatistics, The Ohio State University College of Medicine; Yu Lianbo, Center for Biostatistics, The Ohio State University College of Medicine; Soledad Fernandez , Center for Biostatistics, The Ohio State University College of Medicine
11:35 AM
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Bayesian Analysis for Multi-Subject Time Course RNA-Seq Experiments
Allison Tegge, Virginia Tech; Shiqi Cui, Google; Marco Ferreira, Virginia Tech
11:50 AM
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Testing Hypotheses About the Microbiome Using a New Ordination-Based Linear Model
Glen Satten, Centers for Disease Control and Prevention; Yijuan Hu, Emory University
11:55 AM
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Missing Data and Technical Variability in Single-Cell RNA-Sequencing Experiments
Stephanie Hicks, Dana-Farber Cancer Institute/Harvard T.H. Chan School of Public Health; Mingxiang Teng, Dana-Farber Cancer Institute/Harvard T.H. Chan School of Public Health; F. William Townes, Harvard T.H. Chan School of Public Health; Rafael Irizarry, Harvard School of Public Health
2:20 PM
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Application of Generalized Fiducial Inference to Biological Sciences
Jan Hannig, University of North Carolina at Chapel Hill
2:30 PM
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Extracting Insights from Genomic Data via Complex Interactive Heatmaps
Alicia Schep, Stanford School of Medicine
2:30 PM
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Number of Cells to Identify a Novel Subpopulation from a Single Cell RNA Sequencing
Kyung In Kim, Jackson Laboratory
2:35 PM
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Iteratively Adjusted Surrogate Variable Analysis (IA-SVA) Uncovers Hidden Heterogeneity in Bulk and Single Cell Transcriptomic Data
Donghyung Lee
2:50 PM
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SHARP DETECTION in PCA UNDER CORRELATIONS
Edgar Dobriban, Stanford University
3:20 PM
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Wednesday, 08/02/2017
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Comparing Alternative Methods for the Random Selection of a Respondent Within a Household for Online Surveys
Geneviève Vézina, Statistics Canada; Pierre Caron, Statistics Canada
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Comparing Alternative Methods for the Random Selection of a Respondent Within a Household for Online Surveys
Geneviève Vézina, Statistics Canada; Pierre Caron, Statistics Canada
8:40 AM
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Advances and Challenges of Single Cell RNA-Seq Data Analysis
Susmita Datta, University of Florida
8:55 AM
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A Comparative Analysis of Alternative Approaches for the Seasonal Adjustment of Daily and Weekly Data
Gian Luigi Mazzi, Gopa Luxembourg; Dominique Ladiray, INSEE; Jean Palate, National Bank of Belgium ; Tommaso Proietti, University of Rome II
9:15 AM
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Association Analysis Using Sequence Reads Without Calling Genotypes
Yijuan Hu, Emory University; Peizhou Liao, Department of Biostatistics and Bioinformatics, Emory; Henry Johnston, Department of Biostatistics and Bioinformatics, Emory; Andrew Allen, Department of Biostatistics and Bioinformatics, Duke; Glen Satten, Centers for Disease Control and Prevention
9:55 AM
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A Study of Some Alternative Statistical Methods for the Characterization of Tumor Risk Based on PET Imaging Data
Eric Wolsztynski, University College Cork; Tian Mou, University College Cork; Mark Muzi, UW-Radiology, Neurology & RadOnc; Finbarr O'Sullivan, University College Cork
10:35 AM
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Two-Step Mixed Model Approach to Analyzing Differential Alternative RNA Splicing
Li Luo, University of New Mexico Comprehensive Cancer Center; Huining Kang, University of New Mexico; Scott A. Ness, University of New Mexico Comprehensive Cancer Center; Christine A. Stidley, University of New Mexico
10:35 AM
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Informing a Risk Prediction Model for Binary Outcomes with External Coefficient Information
Wenting Cheng, Department of Biostatistics, University of Michigan, Ann Arbor; Jeremy M. G. Taylor, University of Michigan; Bhramar Mukherjee, Department of Biostatistics, University of Michigan, Ann Arbor
10:55 AM
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On the Estimation of Time-Varying Effects in the Nested Case-Control Design
Michelle Nuno; Daniel L. Gillen, University of California, Irvine
10:55 AM
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Evaluating Alternative Comparison Groups for Recipients of Federal Housing Assistance Using the NHIS-HUD Linked Data
Patricia Calderon Lloyd, National Center for Health Statistics; Veronica E. Helms, U.S. Department of Housing and Urban Development; Jon Sperling, U.S. Department of Housing and Urban Development; Lisa B Mirel, CDC/NCHS/OAE/SPB
11:20 AM
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Genome-Wide Study of MiRNA Regulated Gene Expressions Networks in Association with Emphysematous Lung Destruction
Chong Ma, University of South Carolina Columbia; Yen-Yi Ho, University of South Carolina
11:50 AM
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dtangle: a fast and accurate deconvolution estimator
Gregory Hunt, University of Michigan; Johann Gagnon-Bartsch, University of Michigan; Saskia Freytag, Walter and Eliza Hall Institute of Medical Research; Melanie Bahlo, Walter and Eliza Hall Institute of Medical Research
12:05 PM
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Deformation Model Transfer via Equivalent Effects of Lurking Variables in Additive Manufacturing
Arman Sabbaghi, Purdue University; Qiang Huang, University of Southern California
2:05 PM
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A Semi-parametric Bayesian Approach for Detection of Gene Expression Heterosis with RNA-Seq Data
Ran Bi, Iowa State University; Peng Liu, Iowa State University
2:35 PM
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Addressing Differential Measurement Error in Self-Reported Dietary Data Using an External Validation Study: Application to a Longitudinal Lifestyle Intervention Trial
Juned Siddique, Northwestern University; Raymond Carroll, Texas A&M University; Michael J Daniels, University of Texas at Austin; Trivellore Raghunathan, University of Michigan School of Public Health; Elizabeth Stuart, Johns Hopkins University; Laurence Freedman, Gertner Institute for Epidemiology and Health Policy Research
3:05 PM
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Thursday, 08/03/2017
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On Testing Conditional Qualitative Treatment Effects
Chengchun Shi, North Carolina State University; Wenbin Lu, North Carolina State University; Rui Song, NC State University
8:35 AM
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On Estimating Predictive Performance Measures of Risk Prediction Models with External Validation Data
Hajime Uno, Dana Farber Cancer Institute; Eisuke Inoue, Medical Informatics, St. Marianna University School of Medicine
8:50 AM
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A Bayesian GWAS Method Which Utilizes Haplotype Clusters to Make Predictions When Maternal and Paternal Breed Composition Is Known
Danielle Wilson-Wells, University of Nebraska-Lincoln; Stephen D. Kachman, University of Nebraska-Lincoln
9:35 AM
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A Bayesian Hierarchical Model for Single-Cell RNA-Sequencing Data Clustering
Yiyi Liu, Yale University; Hongyu Zhao, Yale University
10:35 AM
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Models for Dependent Data in Single Cell Gene Expression
Andrew McDavid, University of Rochester Medical Center - Rochester, NY
10:50 AM
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Wasserstein Distance Optimization Using the Brenier Map
Samson Koelle, UNIVERSITY OF WASHINGTON
11:35 AM
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