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341 – Analysis of Biomarkers

A Bayesian Approach of Testing for Serial Homogeneity in the Correlation of Longitudinally Measured Biomarkers

Sponsor: Biometrics Section
Keywords: longitudinal study, Metropolis-Hastings, posterior p-value, serial correlation

Thomas M. Braun

University of Michigan

Su Chen

University of Michigan

Timothy D. Johnson

University of Michigan

We wish to determine if the pair-wise correlations of time-adjacent longitudinal data are homogeneous and can be pooled into a single time-invariant value. Historically, this hypothesis has been addressed using an asymptotic Wald test. As an alternative, we propose to evaluate whether the correlation between two continuous biomarkers measured at several time points are equal by examining the posterior predictive p-values within the Bayesian paradigm. We decompose the variance/covariance matrix to standard deviation elements and correlation elements and run a Metropolis-Hastings with Gibbs algorithm. A replicated dataset is generated conditional on each draw of parameters, and a "test statistic" is calculated for both the original and replicated dataset, by which the posterior predictive p-value is determined. The performance of our method is examined via simulation studies. We demonstrate our method on a periodontal longitudinal data set.

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