Bayesian Methodology for Genomics

Wed, Aug 5, 2:00 PM - 3:50 PM Room CC-209 Thomas M. Menino Convention & Exhibition Center

Yuzheng DunChair

Section on Statistics in Genomics and Genetics

7 Presentations

A Bayesian Model for Tumor Immune Subtyping using Spatial Proteomic Imaging Data

2:05 PM - 2:20 PM

Chase Sakitis (Children's Mercy)

Co-authors: Alex Soupir (Moffitt Cancer Center), Brett Reid (Moffitt Cancer Center), Andrew Lawson (Medical University of South Carolina, College of Medicine), Joellen Schildkraut (Emory University), Lauren Peres (Moffitt Cancer Center), Brooke Fridley (Children's Mercy Hospital)

Bayesian clustering immune subtyping ovarian cancer spatial protein imaging data tumor immune microenvironment

A unified hierarchical Bayesian approach to transcriptome-wide association study

2:20 PM - 2:35 PM

Arunabha Majumdar

Co-authors: Arnab Khan (Human Genetics Unit, Indian Statistical Institute Kolkata), Subashani Singh (Department of Biotechnology, Indian Institute of Technology Hyderabad), Tanushree Haldar (Institute for Human Genetics, University of California, San Francisco)

Gene-trait associations Gene expression Horseshoe prior Spike and slab prior Markov chain Monte Carlo multi-ancestry TWAS

Bayesian Neural Networks for Multi-Institutional, Multi-Modal Genomic Data Integration

2:35 PM - 2:50 PM

Mookyong Son (Memorial Sloan Kettering Cancer Center)

Co-authors: Danya Hassan (Keck Graduate Institute), Ronglai Shen (Memorial Sloan-Kettering Cancer Center), Katherine Panageas (Memorial Sloan-Kettering Cancer Center), Yuan Chen (Memorial Sloan Kettering Cancer Center)

data harmonization missing data latent variable models high-dimensional data heterogeneous sequencing panels cancer data science

Bayesian Tree-Based Modeling for Transcriptome-Wide Association Studies

2:50 PM - 3:05 PM

Dona Hasini Gammune (Versiti Blood Research Institute)

Co-authors: Min Chen (University of Texas at Dallas)

TWAS Bayesian additive regression trees (BART)statistical genetics joint modeling nonlinear effects gene regulations

Configuration-based Bayesian Mediation Model for Survival Outcomes

3:05 PM - 3:20 PM

Yung-Han Chang (University of Texas MD Anderson Cancer Center)

Co-authors: Arjun Bhattacharya (UT MD Anderson Cancer Center), Ryan Sun (University of Texas, MD Anderson Cancer Center)

Mediation Analysis Survival Analysis Genetics Two-group model High-dimensional inference

Robust Bayesian High-dimensional Mediation Analysis in cancer genomics studies