Contributed Poster Presentations: Section on Statistics in Genomics and Genetics -- JSM 2023

47 A Bayesian model for assessing ITH of tumor infiltrating leukocytes with multi-region RNAseq data

Co-authors: Ying Yuan (University of Texas, MD Anderson Cancer Center), Jianjun Zhang (The University of Texas MD Anderson Cancer Center), Ziyi Li (MD Anderson Cancer Center)

48 A Composite Likelihood Approach to Gaussian Network Differentiation

James Adefisoye

Co-authors: Hongmei Zhang (University of Memphis)

49 A quadratic-programming representation for sample-level analyses in large single-cell datasets

Jack Kamm

50 Accurate Detection of MicroRNAs from NanoString nCounter with a Latent Mixture Model

Chang Yu

Co-authors: Zhijin Wu (Brown University)

51 Algorithmic bias in single cell analysis

Pilhwa Lee (Morgan State University)

Co-authors: Jayshawn Cooper (Morgan State University), Christina Young (Morgan State University)

52 AMEND: Active Module identification using Experimental data and Network Diffusion

Samuel Boyd

Co-authors: Jeffrey Thompson (University of Kansas Medical Center), Chad Slawson (University of Kansas Medical Center)

54 Polygenic Risk Score (PRS)

Qinmengge Li

Co-authors: Matthew Patrick (University of Michigan), Haihan Zhang (University of Michigan), Chachrit Khunsriraksakul (Pennsylvania State University), Philip Stuart (University of Michigan), Johann Gudjonsson (University of Michigan), Rajan Nair (University of Michigan), James Elder (University of Michigan), Dajiang Liu (Penn State College of Medicine), Jian Kang (University of Michigan), Lam Tsoi (University of Michigan), Kevin (Zhi) He (University of Michigan)

55 BSDE: barycenter single-cell differential expression for case–control studies

Mengqi Zhang

Co-authors: Richard Guo

57 Comparing different statistical models by simulation in genome-wide association studies

Hung-Chih Ku (DePaul University)

Co-authors: Zhengyang Zhou, Chao Xing (UT Southwestern Medical Center)

60 Feature selection for high-dimensional features from fluorescence cell images

Anqi Zhu (Genentech, Inc.)

63 Meta-analysis of Gene-level Association Test based on Optimal Weighted scheme via Summary statistics

lIRONG ZHU (Michigan Technological Univ - Houghton, MI)

65 Multi-Omics Cell Type Deconvolution with Multi-modal Learning

Molin Yue (University of Pittsburgh)

Co-authors: Jiebiao Wang (University of Pittsburgh), Wei Chen (University of Pittsburgh)

66 Non-parametric Clustering of Joint Pattern Multi-genetic/epigentic Factors Weighted by Covariates.

Joseph Handwerker

Co-authors: Meredith Ray (University of Memphis)

67 PECMAN: Partial Sum statistics for High-Dimensional Causal Mediation Analysis

Hung-Ching Chang

Co-authors: Yusi Fang (University of Pittsburgh), Michael Gorczyca (University of Pittsburgh), George Tseng (University of Pittsburgh)

68 SARS-CoV-2 Mutations Spread Tracking and New Variant Risk Level Prediction

Wenjun He (State University of New York Buffalo)

Co-authors: Miriam Zhu (Thomas S. Wootton High School), Rong Hai (UC Riverside)

69 Powerful Partial Conjunction Hypothesis Testing via Conditioning

Biyonka Liang

Co-authors: Lu Zhang (Harvard University), Lucas Janson (Harvard University)

70 Significant Gene Analysis and Cluster-Based Machine Learning for Breast Cancer Relapse Prediction

Myrine Barreiro-Arevalo

Co-authors: Hansapani Rodrigo (University of Texas-Rio Grande Valley)

73 Ultimate Deconvolution: methods and software for estimating heterogeneous effect sharing patterns

yunqi yang

Co-authors: Peter Carbonetto (The University of Chicago), Matthew Stephens (The University of Chicago)

WITHDRAWN 53 An Online Interactive Tool for Analyzing&Visualizing Racial Difference in Gene Mutations for Cancer

Co-authors: Emily Wang (Park Tudor School), Lucas Liu (The Westminster Schools)

WITHDRAWN 56 Cellcano: supervised cell type identification for single cell ATAC-seq data

WITHDRAWN Constructing genotype and phenotype network helps reveal disease heritability and phenome-wide association studies

Co-authors: Xuewei Cao (Michigan Technological Univ), lIRONG ZHU (Michigan Technological Univ - Houghton, MI), Xiaoyu Liang (Michigan State University), Shuanglin Zhang (Michigan Technological University), Qiuying Sha (Michigan Technological Univ - Houghton, MI)

WITHDRAWN Cross-Validation Correction for Statistical Models in Genomics Data

Co-authors: Yanzhao Qian (University of Calgary), Dinghao Wang, Matthew Greenberg (University of Calgary), Quan Long (University of Calgary)

WITHDRAWN Genome Hierarchy Grouping Structure Guided Feature Selection for Multivariate Outcome

Co-authors: Xueping Zhou, Manqi Cai, Yanming Li, Wei Chen (University of Pittsburgh)

WITHDRAWN Hierarchical Bayesian Modeling with Functional Annotations for Multi-Ancestry Polygenic Scores

Co-authors: Sophia Gunn, Kathryn Lunetta (Boston University School of Public Health)

WITHDRAWN Mixed models for analyzing the gut microbiome changes over time

Co-authors: Amy Pan (Medical College of Wisconsin), Silvia Munoz-Price (VCU Health System), Samantha Atkinson (Medical College of Wisconsin), Nita Salzman (Medical College of Wisconsin)

WITHDRAWN Testing Equivalent Gene Expression Across Cystic Fibrosis Human Airway Models

Co-authors: Gengming He, Lisa Strug

WITHDRAWN Trans-ancestry two-sample Mendelian Randomization using GWAS summary data

Co-authors: Siyuan Chen (The Pennsylvania State University College of Medicine), Dajiang Liu (Penn State College of Medicine)

Contributed Poster Presentations: Section on Statistics in Genomics and Genetics

27 Presentations