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CC = Vancouver Convention Centre   F = Fairmont Waterfront Vancouver
* = applied session       ! = JSM meeting theme

Activity Details

299 Tue, 7/31/2018, 8:30 AM - 10:20 AM CC-West 212
SPEED: Recent Advances in Statistical Genomics and Genetics — Contributed Speed
Biometrics Section, Section on Statistics in Genomics and Genetics, Section on Teaching of Statistics in the Health Sciences
Chair(s): Jia Hua, State University of New York At Buffalo
Poster Presentations for this session.
8:35 AM Subset Testing and Analysis of Multiple Phenotypes
Andriy Derkach, National Cancer Institute; Ruth Pfeiffer , National Cancer Institute
8:40 AM ProxECAT: Proxy External Controls Association Test. a New Case-Control Gene Region Association Test Using Allele Frequencies from Public Controls
Audrey Hendricks, University of Colorado - Denver; Stephen Billups, University of Colorado - Denver; Hamish Pike, University of Colorado-Aschutz Medical Campus; Eleftheria Zeggini, Wellcome Trust Sanger Institute; Stephanie Santorico, University of Colorado - Denver; InĂªs Barroso, Wellcome Trust Sanger Institute; Josee Dupuis, Boston University School of Public Health
8:45 AM NanoStringDiffWeb: a Web-Based Tool for Differential Expression Analysis of NanoString NCounter Data
Tingting Zhai, University of Kentucky; Hong Wang, Eli Lilly and Company; Arnold Stromberg, University of Kentucky; Chi Wang, University of Kentucky; Jinpeng Liu, Markey Cancer Center, University of Kentucky; Isaac Hands, Markey Cancer Center, University of Kentucky; Eric B. Durbin, Markey Cancer Center, University of Kentucky; Heidi Weiss, Markey Cancer Center, University of Kentucky
8:50 AM Three-Component Dissection of Tumor Cellular Heterogeneity by a Bayesian Hierarchical Model

Tao Wang, UT Southwestern Medical Center
8:55 AM Visualization Methods for RNA-Sequencing Data Analysis

Lindsay Rutter, Iowa State University; Dianne Cook, Monash University
9:00 AM A Bayesian Gene-Based GWAS Analysis of Osteosarcoma Trio Data Using a Hierarchically Structured Prior

Yi Yang, University of Minnesota; SAONLI BASU, University of Minnesota; Lisa Mirabello, National Institutes of Health; Logan Spector, University of Minnesota; Lin Zhang, University of Minnesota
9:05 AM Differences in Gene Silencing Effect of MiRNA and Methylation in Two Histologic Subtypes
Prabhakar Chalise, University of Kansas Medical Center
9:10 AM SAVER: Gene Expression Recovery for UMI-Based Single Cell RNA Sequencing

Mo Huang, University of Pennsylvania; Jingshu Wang, University of Pennsylvania; Mingyao Li, University of Pennsylvania; Nancy Zhang, University of Pennsylvania
9:15 AM Dysregulated Expression of Glucose Metabolic Enzymes Is Associated with Poor Prognosis of Patients with Hepatocellular Cancer

Xiaoli Zhang, Ohio State University; Kalpana Ghoshal, The Ohio State University
9:20 AM An Ensemble RNA-Seq Differential Analysis Method for False Discovery Rate Control

Dongmei Li, University of Rochester; Ananta Paine, University of Rochester; Timothy D. Dye, University of Rochester
9:30 AM A Two-Stage Microbial Association Mapping Framework with Advanced FDR Control

Jiyuan Hu, New York University School of Medicine; Huilin Li, New York University; Hyunwook Koh, NYU langone medical center; Linchen He, NYU langone medical center; Martin Blaser, New York University School of Medicine
9:35 AM Penalized Latent Dirichlet Allocation Model in Single Cell RNA Sequencing

Xiaotian Wu, Brown University; Zhijin Wu, Brown University; Hao Wu, Emory University
9:50 AM Four-Step Cross-Validation Procedure in Biomarker Prognostic Cox Model Development
Jianying Zhang, Ohio State University; Lianbo Yu, Ohio State University; Charles L Shapiro, Mount Sinai Medical Center
9:55 AM Microbial Network Estimation Using Compositional Graphical Lasso
Chuan Tian, Oregon State University; Duo Jiang, Oregon State University; Tom Sharpton, Oregon State University; Yuan Jiang, Oregon State University
10:00 AM Differential Abundance Analysis with Empirical Bayes Shrinkage Estimation of Variance (DASEV) for Proteomic and Metabolomic Data

Zhengyan Huang; Chi Wang, University of Kentucky; Arnold Stromberg, University of Kentucky
10:10 AM Using Area Under PSD to Detect the Tumor Heterogeneity Difference with Single Cell Data
Yian Chen, Moffitt Cancer Center & Research Institute; Jiannong Li, Moffitt Cancer Center & Research Institute; Inna Smalley, Moffitt Cancer Center & Research Institute; Michael J Schell, Moffitt Cancer Center & Research Institute; Keiran S Smalley, Moffitt Cancer Center & Research Institute
10:15 AM Identifying Direct Targets with Knockdown Experiment: An Adaptive Approach Detecting Strong Signals
Leying Guan, Stanford University