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Activity Number: 521 - Model/Variable Selection
Type: Contributed
Date/Time: Wednesday, August 1, 2018 : 10:30 AM to 12:20 PM
Sponsor: Biometrics Section
Abstract #329500 Presentation
Title: Fast and Approximate Exhaustive Variable Selection for GLMs with APES
Author(s): Kevin Wang* and Samuel Mueller and Garth Tarr and Jean Yee Hwa Yang
Companies: The University of Sydney and The University of Sydney and The University of Sydney and University of Sydney, Australia
Keywords: variable selection; exhaustive search; generalized linear model; model selection

Obtaining maximum likelihood estimates for generalised linear models (GLMs) is computationally intensive and remains as the major obstacle for performing exhaustive variable selection. On the other hand, efficient algorithms for exhaustive searches do exist for linear models, most notably the leaps and bound algorithm and, more recently, the mixed integer optimisation algorithm.

In this talk, we present APES (APproximated Exhaustive Search) a new method that approximates all subset selection for a given GLM by reformulating the problem as a linear model. The method works by learning from observational weights in a correct/saturated generalised linear regression model. APES can be used in partnership with any other state-of-the-art linear model selection algorithm, thus enabling (approximate) exhaustive model exploration in dimensions much higher than previously feasible.

We will demonstrate that APES model selection is competitive against genuine exhaustive search via simulation studies and applications to health data. The APES method is made available in R through the mplot package.

Authors who are presenting talks have a * after their name.

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