Abstract Details
|
Activity Number:
|
276
|
|
Type:
|
Topic Contributed
|
|
Date/Time:
|
Tuesday, August 5, 2014 : 8:30 AM to 10:20 AM
|
|
Sponsor:
|
International Indian Statistical Association
|
|
Abstract #313218
|
View Presentation
|
|
Title:
|
Integration of Trees in Microbiome Data Analyses
|
|
Author(s):
|
Susan Holmes*+
|
|
Companies:
|
Stanford University
|
|
Keywords:
|
Microbiome ;
Phylogenetic Tree ;
NGS ;
16sRNA ;
Normalization
|
|
Abstract:
|
Contingent Phylogenetic Information is available when collecting NGS 16sRNA reads that provide the basis for many Microbiome studies. This information can be used at several stages of the analyses: denoising, normalization and computation of distances as well as for diversity estimation. I will show how we can effectively capitalize on phylogenetic information for classifying and testing for differential abundance in these type of data.
|
Authors who are presenting talks have a * after their name.
Back to the full JSM 2014 program
|
2014 JSM Online Program Home
For information, contact jsm@amstat.org or phone (888) 231-3473.
If you have questions about the Professional Development program, please contact the Education Department.
The views expressed here are those of the individual authors and not necessarily those of the JSM sponsors, their officers, or their staff.
Copyright © American Statistical Association.