JSM 2012 Online Program
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Online Program HomeActivity Details
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| 224 | Mon, 7/30/2012, 2:00 PM - 3:50 PM | CC-Room 28C | |
| Statistical and Computational Challenges in Metagenomic Analysis of Next-Generation Sequencing Data — Topic Contributed Papers | |||
| Section on Statistical Computing , WNAR | |||
| Organizer(s): Xinping Cui, University of California at Riverside | |||
| Chair(s): Xinping Cui, University of California at Riverside | |||
| 2:05 PM | Alignment-Free Genome and Metagenome Comparison Using K-Tuples — Fengzhu Sun, University of Southern California | ||
| 2:25 PM | Normalization and Differential Expression in RNA-Seq — Davide Risso, University of California at Berkeley ; Sandrine Dudoit, University of California at Berkeley | ||
| 2:45 PM | Taxonomic Assignment of Metagenomic Sequencing Reads — Hongmei Jiang, Northwestern University ; Lingling An, University of Arizona | ||
| 3:05 PM | Quantifying Taxonomic and Functional Diversity of Metagenomes from Next-Generation Sequencing Data — Katherine Pollard, Gladstone Institutes, UCSF ; Thomas J. Sharpton, Gladstone Institutes, UCSF ; Rebecca Truty, Gladstone Institutes, UCSF ; Joshua Ladau, Gladstone Institutes, UCSF ; Samantha Riesenfeld, Gladstone Institutes, UCSF ; Guillaume Jospin, University of California at Davis ; Steven Kembel, University of Oregon ; Morgan Langille, University of California at Davis ; James O'Dwyer, Santa Fe Institute ; Dongying Wu, University of California at Davis ; Jessica Green, University of Oregon ; Jonathan Eisen, University of California at Davis | ||
| 3:25 PM | Efficient Separation of Metagenomic Short Reads Into Genomes via Multistage Clustering — Olga Tanaseichuk, University of California at Riverside ; Tao Jiang, University of California at Riverside | ||
| 3:45 PM | Floor Discussion | ||
2012 JSM Online Program Home
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