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Activity Number: 132
Type: Contributed
Date/Time: Monday, August 3, 2009 : 8:30 AM to 10:20 AM
Sponsor: Section on Bayesian Statistical Science
Abstract - #304321
Title: A Comparison of Minimum Description Length Scores for Bayesian Networks
Author(s): Jason LaCombe*+ and Anthony Almudevar
Companies: University of Rochester Medical Center and University of Rochester Medical Center
Address: Dept. of Biostatistics and Computational Biology, Rochester, NY, 14642,
Keywords: Pedigree Estimation ; Graphical Models ; Bayesian Inference ; Minimum Description Length
Abstract:

The use of Bayesian networks finds applications in many areas of statistical modeling, one example being that of pedigree estimation. A pedigree may be modeled as a Bayesian network with each node possessing at most two parent nodes. The focus of the inference is on correctly estimating the underlying structure of the associated graph. However, an adequate solution has not yet been proposed to address the tendency of maximum likelihood estimation to over-fit the data when many nodes have parents outside the sample. To resolve this problem we use inference methods based on the Minimum Description Length principle. The focus of our work is on comparing the Normalized Maximum Likelihood (NML) score with alternative scoring methods that encode the underlying graph directly. The performance of the methods will be illustrated on simulated pedigrees.


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