JSM Preliminary Online Program
This is the preliminary program for the 2008 Joint Statistical Meetings in Denver, Colorado.

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Activity Number: 426
Type: Invited
Date/Time: Wednesday, August 6, 2008 : 2:00 PM to 3:50 PM
Sponsor: IMS
Abstract - #300461
Title: Stochastic Modeling in Nanoscale Biophysics: Subdiffusion Within Proteins
Author(s): Samuel Kou*+
Companies: Harvard University
Address: Department of Statistics, Cambridge, MA, 02138,
Keywords: single-molecule experiments ; protein conformational dynamics ; memory kernel ; generalized Langevin equation ; autocorrelation function ; protein conformational dynamics ; memory kernel ; generalized Langevin equation ; autocorrelation function
Abstract:

Advances in nanotechnology have allowed scientists to study biological processes on an unprecedented nanoscale molecule-by-molecule basis, opening the door to addressing many important biological problems. A phenomenon observed in recent nanoscale single-molecule biophysics experiments is subdiffusion, which largely departs from the classical Brownian diffusion theory. In this paper, by incorporating fractional Gaussian noise into the generalized Langevin equation, we formulate a model to describe subdiffusion. In addition to its analytical tractability and clear physical underpinning, the model is capable of explaining data collected in fluorescence studies on single protein molecules. Excellent agreement between the model prediction and the single-molecule experimental data is seen.


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Revised September, 2008