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Activity Number: 102
Type: Contributed
Date/Time: Monday, July 30, 2007 : 8:30 AM to 10:20 AM
Sponsor: Biometrics Section
Abstract - #310037
Title: Conservatively Optimal Multiple Testing for Comparative Microarray Experiments
Author(s): James Signorovitch*+
Companies: Harvard University
Address: Dept. of Biostatistics, Boston, MA, 02115,
Keywords: gene expression ; optimal multiple testing ; empirical Bayes ; false discovery rate
Abstract:

Optimality theory for multiple hypothesis testing is considered in the context of gene expression microarray experiments. We show that optimal testing procedures are generally not identifiable but by conditioning on certain sufficient statistics we can define near-optimal procedures that are identifiable and conservative. In simulations and in real data, estimates of these near-optimal procedures are shown to substantially outperform the estimated Optimal Discovery Procedure (Storey et al. 2005) and the Empirical Alternative Hypothesis (Signorovitch 2006) by exploiting strong patterns in the data that are generally ignored.


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Revised September, 2007