JSM Preliminary Online Program
This is the preliminary program for the 2007 Joint Statistical Meetings in Salt Lake City, Utah.

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Activity Number: 491
Type: Invited
Date/Time: Thursday, August 2, 2007 : 8:30 AM to 10:20 AM
Sponsor: IMS
Abstract - #307708
Title: A Simple and Improved Correction for Population Stratification in Genetic Association Studies
Author(s): Michael Epstein*+
Companies: Emory University
Address: School of Medicine, Atlanta, GA, 30322,
Keywords:
Abstract:

Case-control studies of disease-gene association must often correct for potential bias resulting from the effects of population stratification, which originates from the coupling of allele-frequency heterogeneity to disease-risk heterogeneity within a population. Such stratification remains an important issue in association studies, even within populations thought to be homogeneous in nature. To provide an improved correction for stratification, we propose a simple two-step procedure. First, we construct a model for the odds of disease given a set of marker loci (excluding the loci of interest) that can provide information on population substructure. We use the first-step model to assign subjects to strata based on their odds of disease given marker genotypes. Then, in the second step, we test for disease-gene association adjusting for the strata using logistic regression.


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Revised September, 2007