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Activity Number: 382
Type: Contributed
Date/Time: Wednesday, August 9, 2006 : 8:30 AM to 10:20 AM
Sponsor: Biometrics Section
Abstract - #307407
Title: Clustering Genes in Genetical Genomics Experiments
Author(s): Joshua Sampson*+ and Steve Self
Companies: University of Washington and University of Washington
Address: Department of Biostatistics, SEATTLE, WA, 981957475,
Keywords: expression ; QTL ; clustering ; pleiotropy
Abstract:

Traditionally, genes are clustered into groups that share a similar pattern of expression over time or under changing experimental conditions. Now, due to the emergence of genetical genomics, gene expression is also measured over varying genetic backgrounds. Standard genomics' clustering methods group genes based solely on expression profiles, ignoring linkage information. In contrast, other methods for genetical genomics treat expression measurements as quantitative traits in a linkage study. Therefore, we propose a new clustering method that groups genes together when they share a common set of QTLs.


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