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Activity Number: 134 - Recent Development in Methods for Statistical Genetics
Type: Contributed
Date/Time: Monday, July 30, 2018 : 8:30 AM to 10:20 AM
Sponsor: Section on Bayesian Statistical Science
Abstract #328831
Title: Two-Way Sparsity for Time-Varying Networks, with Applications in Genomics
Author(s): Thomas Bartlett* and Ricardo Silva and Ioannis Kosmidis
Companies: University College London and University College London and University of Warwick
Keywords: Bayesian statistics; models of time-varying networks; sparse statistical models; genomic networks; developmental neurobiology
Abstract:

We propose a novel way of modelling time-varying networks, by inducing two-way sparsity on local models of node connectivity. This two-way sparsity separately promotes sparsity across time and sparsity across variables (i.e., within time). Separation of these two types of sparsity is achieved with the introduction of a novel prior structure, which draws on ideas from the Bayesian lasso and from copula modelling. We provide an efficient implementation of our model via a Gibbs sampler, and we apply our model to data from neural development. In doing so, we demonstrate that our model is able to infer changes in genomic network structure which match current biological knowledge. The novel network structures which are inferred by our model identify potential targets for further experimental investigation by neuro-biologists.


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