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Activity Number: 132
Type: Contributed
Date/Time: Monday, August 3, 2009 : 8:30 AM to 10:20 AM
Sponsor: Section on Bayesian Statistical Science
Abstract - #304762
Title: Two-Class Prediction with Model Selection and Averaging
Author(s): Wensong Wu*+ and Edsel A. Pena
Companies: University of South Carolina and University of South Carolina
Address: 216 LeConte College , Columbia, SC, 29208,
Keywords: two-class prediction ; model selection ; model averaging ; Bayesian decision function
Abstract:

We investigated a two-class prediction problem which is relevant in the analysis of microarray data, where of interest is to simultaneously predict the class memberships of a set of new subjects based on a set of completely observed subjects and the covariate information of the new subjects. Only a few predictor variables might be useful, and the link function relating class membership and predictor variables may not be completely known. There is therefore a need to take into account the selection of both the link function and predictor variables. A Bayesian decision function is developed using a combination of false discovery rate (FDR) and missed discovery rate (MDR) loss functions. The performance of this prediction function, which possesses a model-averaging property, is investigated and compared using a simulation study with other prediction models such as support vector machines.


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