Keyword Search
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CC = Vancouver Convention Centre F = Fairmont Waterfront Vancouver
* = applied session ! = JSM meeting theme
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Keyword Search Criteria: omics returned 77 record(s)
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Sunday, 07/29/2018
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The Measurement of the Aggregate Economic Performance for the United States via the Composite Economic Index (CEI)
Brian Sloboda, University of Phoenix; Chandrasekhar Putcha, California State University, Fullerton
2:50 PM
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Data Adaptive Evaluation of Preprocessing Methods Using Ensemble Machine Learning
Rachael Phillips, Biostatistics, UC Berkeley
4:05 PM
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Multivariate FDR Control for Omics Data Integration
Ali Shojaie, University of Washington; Kasra Alishahi, Sharif University of Technology; Ahmad Reza Ehyaee, Sharif University of Technology
4:25 PM
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A Bayesian Hierarchical Model for Analyzing Methylated RNA Immunoprecipitation Sequencing Data
Minzhe Zhang, University of Texas Southwestern Medical Center; Qiwei Li, University of Texas Southwestern Medical Center; Yang Xie, University of Texas Southwestern Medical Center
4:35 PM
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Sample Size and Power Analysis for RNA-Seq Differential Expression in Paired Study Designs
Masha Kocherginsky, Northwestern University; Kwang-Youn Kim, Northwestern University ; Daniela E Matei, Northwestern University
4:45 PM
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Paying for Privacy While Selling Your Data: a Discrete Choice Experiment
Zhouyu Wu, Cornell University
5:20 PM
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Incorporating Host Genomics Data and Microbial Network Inference
Richard Bonneau, NYU Center for Data Science & Simons Foundation
5:25 PM
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Monday, 07/30/2018
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Integration of Multiple 'Omic Data Types for Screening Disease-Related Gene Sets with Applications in Lung Cancer
Su Hee Chu, Brigham and Women's Hospital and Harvard Medical School; Yen-Tsung Huang, Academia Sinica
8:35 AM
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Pathway and Network-Based Integrative Bayesian Modeling of Multiplatform Genomics Data
Veera Baladandayuthapani, UT MD Anderson Cancer Center; Jeffrey S Morris, The University of Texas M.D. Anderson Cancer Center; Elizabeth McGuffey, United States Naval Academy; Raymond J. Carroll, Texas A & M University; Min Jin Ha, UT MD Anderson Cancer Center
9:00 AM
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Two-Way Sparsity for Time-Varying Networks, with Applications in Genomics
Thomas Bartlett, University College London; Ricardo Silva, University College London; Ioannis Kosmidis, University of Warwick
9:50 AM
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Empirical Bayes Estimation of Gene Expression Fold Change
Abbas Rahal, University of Ottawa; Marta Padila, University of Ottawa; David R. Bickel, University of Ottawa
10:05 AM
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Hierarchical Processing for LC/MS Metabolomics Data Generated in Multiple Batches
Douglas Walker, Emory University; Karan Uppal, Emory University; Dean Jones, Emory University; Tianwei Yu, Emory University
10:35 AM
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Joint Testing in High-Dimensional Instrumental Variables Regression with an Application to Genomics Data
Jiarui Lu, University of Pennsylvania; Hongzhe Li, University of Pennsylvania
10:35 AM
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Leveraging Omics Biomarker in Early Clinical Trials - Concept, Utility and Impact on Decision Making
Weidong Zhang, Pfizer Inc.
10:35 AM
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Likelihood Estimation of Large Species Trees from Multiple Samples Per Species, Using the Coalescent Process
Arindam RoyChoudhury, Cornell University
10:55 AM
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Robust Bayesian Variable Selection for Modeling Mean Medical Costs
Lei Liu, Washington University in St Louis; Grace Yoon, Texas A&M University; Wenxin Jiang, Northwestern University; Tina Shih, MD Anderson Cancer Center
11:25 AM
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Bayesian Network Models for Integrating Genetics and Metabolomics Data
Denise Marie Scholtens, Northwestern University; Alan Kuang, Northwestern University
11:25 AM
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Nonparametric Mediation Analysis for Investigating the ROle of Microbiome Health
Kyle Carter, University of Arizona; Meng Lu, University of Arizona; Lingling An, University of Arizona
11:50 AM
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Statistical Issues in the Design and Analysis of Sequencing Studies
Danyu Lin, University of North Carolina
2:05 PM
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Statistical Methods for Integrative Analysis of Multi-Omics Data with Applications to Psychiatric Disorders
Hongyuan Cao, University of Missouri-Columbia; Jun Chen, Mayo Clinic; Xianyang Zhang, Texas A&M University
2:30 PM
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A Bayesian Nonparametric Method for Zero-Inflated Data with Applications to Medical Costs
Arman Oganisian, University of Pennsylvania; Nandita Mitra, University of Pennsylvania; Jason Roy, University of Pennsylvania
3:05 PM
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A Bilinear Regression Approach to Inform Variable Selection by Continuous Functional Annotation Information
Pixu Shi; Sunduz Keles, University of Wisconsin, Madison; Ming Yuan, Columbia University
3:05 PM
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Analysis of Mental Disorder Omics Data: An Integrative Perspective
Shuangge Ma, Yale University
3:20 PM
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A Two-Part Semiparametric Model for Metabolomics and Proteomics Data
Li Chen, University of Kentucky; Yuntong Li, University of Kentucky; Teresa Fan, University of Kentucky; Andrew Lane, University of Kentucky; Woo-Young Kang, University of Kentucky; Susanne Arnold, University of Kentucky; Arnold Stromberg, University of Kentucky; Chi Wang, University of Kentucky
3:20 PM
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Powering Biomarker Discovery Studies for Training and Validation
Olga Demler, Harvard Medical School; Nancy R Cook, Harvard Medical School
3:35 PM
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Tuesday, 07/31/2018
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Statistical Analysis of Radiomics Data
Samantha Morrison, Brown University; Firas Ahmed, Columbia University; Lin Lu, Columbia University; Constantine Gatsonis, Brown University; Binsheng Zhao, Columbia University
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Proteomics and Genomics Integration and Ovarian Cancer Survival
Umut Ozbek, Icahn School of Medicine at Mount Sinai; Christopher Conley, University of California at Davis; Jie Peng, UC Davis; Pei Wang, Icahn School of Medicine at Mount Sinai
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SAVER: Gene Expression Recovery for UMI-Based Single Cell RNA Sequencing
Mo Huang, University of Pennsylvania; Jingshu Wang, University of Pennsylvania; Mingyao Li, University of Pennsylvania; Nancy Zhang, University of Pennsylvania
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Statistical Ethics and Challenging Substantial Errors in Statistical Methods and Results in a Prominent Peer Reviewed Economics Journal
Chris Barker, Statistical Planning and Analysis Services, Inc.
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Differential Abundance Analysis with Empirical Bayes Shrinkage Estimation of Variance (DASEV) for Proteomic and Metabolomic Data
Zhengyan Huang; Chi Wang, University of Kentucky; Arnold Stromberg, University of Kentucky
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Inferring Networks from Personal, Dense, Dynamic Data Clouds of Biological and Quantified-Self Data
Elisa Sheng, Arivale
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Cloud Computing Approaches to Genomic Data Science
Sean Davis, National Cancer Institute
8:35 AM
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Data Integration for the Simultaneous Estimation of Normal Means
Sihai Dave Zhao, University of Illinois at Urbana-Champaign
8:55 AM
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Improving the Value of Public Data with Recount2 and Phenotype Prediction
Shannon Ellis, Johns Hopkins University, Bloomberg School of Public Health
8:55 AM
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SAVER: Gene Expression Recovery for UMI-Based Single Cell RNA Sequencing
Mo Huang, University of Pennsylvania; Jingshu Wang, University of Pennsylvania; Mingyao Li, University of Pennsylvania; Nancy Zhang, University of Pennsylvania
9:10 AM
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Analyzing Large Scale Genomics Data with Apache Spark and ADAM
Frank Nothaft, Databricks
9:15 AM
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Robust Score Tests with Missing Data in Genomics Studies
Kin Yau Wong, Hong Kong Polytechnic University; Donglin Zeng, UNC Chapel Hill; Danyu Lin, University of North Carolina
9:20 AM
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BAYESMETAB: TREATMENT of MISSING VALUES in METABOLOMIC STUDIES USING a BAYESIAN MODELING APPROACH
Jasmit Shah, Aga Khan University Hospital; Guy Brock, Ohio State University College of Medicine; Jeremy Gaskins, University of Louisville
9:35 AM
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Big Data Distributed System for Phenome and Genome Management and Analysis in a Large Health System
Wendy Wong, Inova Translational Medicine Institute; Xinyue Liu, Inova Translational Medicine Institute; Prachi Kothiyal, Inova Translational Medicine Institute; Wei Zhu, Inova Translational Medicine Institute; Fang Zhou, Inova Translational Medicine Institute; Shan Gao, Inova Translational Medicine Insitute; Sakthi Madhappan, Inova Translational Medicine Institute; Lin Smith, Inova Translational Medicine Institute; Henry Hunter, Inova Translational Medicine Institute; Aaron Black, Inova Translational Medicine Institute; John F Deeken, Inova Translational Medicine Institute; John E Niederhuber, Inova Translational Medicine Institute
9:55 AM
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Differential Abundance Analysis with Empirical Bayes Shrinkage Estimation of Variance (DASEV) for Proteomic and Metabolomic Data
Zhengyan Huang; Chi Wang, University of Kentucky; Arnold Stromberg, University of Kentucky
10:00 AM
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Statistical Methods for Single-Cell RNA-Seq in Studies of Mammalian Development
Christina Kendziorski, University of Wisconsin - Madison; Zijian Wang, University of Wisconsin - Madison; Ron Stewart, Morgridge Institute for Research; Chris Barry, Morgridge Institute for Research; Li-Fang Chu, Morgridge Institute for Research
10:35 AM
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Iterated Curve Registration Extracts Signals from Noisy DNA Molecule Measurements
Subhrangshu Nandi, University of Wisconsin - Madison; Michael Newton, University of Wisconsin at Madison; David C Schwartz, University of Wisconsin - Madison
10:35 AM
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Statistical Ethics and Challenging Substantial Errors in Statistical Methods and Results in a Prominent Peer Reviewed Economics Journal
Chris Barker, Statistical Planning and Analysis Services, Inc.
11:20 AM
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Inferring Networks from Personal, Dense, Dynamic Data Clouds of Biological and Quantified-Self Data
Elisa Sheng, Arivale
11:40 AM
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Inference of Transcription Factor Binding Sites in New Cell Types from Open Chromatin and Gene Expression Data
Michael M. Hoffman, Princess Margaret Cancer Centre/University of Toronto; Mehran Karimzadeh, University of Toronto
2:05 PM
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The Generalized Ridge Estimator of the Inverse Covariance Matrix
Wessel Van Wieringen, VU Medical Center
2:20 PM
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A Multivariate Mixed-Effects Selection Model Framework for Batch-Processed Proteomics Data with Nonignorable Missingness
Jiebiao Wang, Carnegie Mellon University; Pei Wang, Icahn School of Medicine at Mount Sinai ; Donald Hedeker, University of Chicago; Lin Chen, University of Chicago
2:25 PM
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Detecting Developmental Expression Switches from Transcriptomic and Epigenomic Data
Claudia Kleinman, McGill University; Marie Forest, Lady Davis Research Institute, McGill University; Selin Jessa, McGill University; Celia M.T. Greenwood, Lady Davis Research Institute, McGill University
2:25 PM
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Large Numbers of Explanatory Variables
Heather Battey, Imperial College London; David Cox, Nuffield College
2:30 PM
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Variation and Genetic Control of Protein Abundance in Human Tissues
Hua Tang, Stanford Dept. of Genetics
2:45 PM
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Inferring the Impact of Genetic Variation on Regulatory Networks
Sara Mostafavi
2:45 PM
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Understanding Gene Regulation Through Graph-Based Posterior Regularization in Structured Probabilistic Models
Maxwell Libbrecht, Simon Fraser University
3:05 PM
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Predicting Cancer Outcomes from Genomics Data
Peter Campbell, Wellcome Trust Sanger Institute
3:20 PM
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Wednesday, 08/01/2018
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Secondary Data Analysis to Predict Therapeutic Outcome of Colorectal Cancer Patients
Hannah Monique Bredikhin, Purdue University; Jun Xie, Purdue University
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Mediation with Latent Variables
Joshua Sampson, National Cancer Institute; Andriy Derkach, National Cancer Institute; Ruth Pfeiffer , National Cancer Institute
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Integrative Analysis of Actively Identified Pathways from Multi-Modal Omics Data
Pei-Li Wang, University of Florida; George Michailidis, University of Florida
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Expansion of a stochastic model for assessing CT reinfection risk
Kristin Olson, University of Alabama at Birmingham; William Geisler, University of Alabama at Birmingham; Hemant Tiwari, University of Alabama at Birmingham
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An Integrated Microbe-Metabolite Interaction Map
Jing Ma, Fred Hutch Cancer Research Center
8:35 AM
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Generalized Bayesian Factor Analysis for Integrative Clustering with Application to Multi-Modal Omics Data
Eun Jeong Min, University of Pennsylvania; Changgee Chang, University of Pennsylvania; Qi Long, University of Pennsylvania
8:50 AM
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Interactive Statistical and Visual Analysis of Longitudinal Metagenomic
Hector Corradoa Bravo, University of Maryland
9:15 AM
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Mitigating the Adverse Impact of Batch Effects in Sample Pattern Detection
Teng Fei, Emory University; Tengjiao Zhang, School of Life Sciences and Technology, Tongji University; Weiyang Shi, School of Life Sciences and Technology, Tongji University; Tianwei Yu, Emory University
9:20 AM
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Genome-Wide Gaussian Process Regression for Survival Time Prediction
Aaron J. Molstad, Fred Hutchinson Cancer Research Center; Wei Sun, Fred Hutchinson Cancer Research Center; Li Hsu, Fred Hutchinson Cancer Research Center, USA
9:50 AM
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Missing Imputation of Cancer Proteome with Iterative Prediction Model
Shrabanti Chowdhury, Icahn School of Medicine at Mount Sinai; Weiping Ma, Icahn School of Medicine at Mount Sinai; Pei Wang, Icahn School of Medicine at Mount Sinai ; Lin Chen, University of Chicago
9:50 AM
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Optimal Estimation of Simultaneous Signals Using Absolute Inner Product with Applications to Integrative Genomics
Rong Ma, University of Pennsylvania; Tianwen Cai, University of Pennsylvania; Hongzhe Li, University of Pennsylvania; Mark G Low, University of Pennsylvania
10:35 AM
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Estimation and Inference for the Indirect Effect in High-Dimensional Linear Mediation Models
Ruixuan Zhou, University of Illinois at Urbana-Champaign; Liewei Wang, Mayo Clinic; Dave Zhao, University of Illinois at Urbana-Champaign
10:50 AM
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Experiences with Teaching Genomic Data Science Online
Kasper Daniel Hansen, Johns Hopkins University
11:15 AM
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Bayesian Integrative Analysis of Radiogenomics
Youyi Zhang, The University of Texas MD Anderson Cancer Center UTHealth Graduate School of Biomedical S; Jeffrey S Morris, The University of Texas M.D. Anderson Cancer Center; Shivali Narang Aerry, Engineering for Professionals, Whiting School of Engineering, Johns Hopkins University; Arvind U.K. Rao, The University of Texas MD Anderson Cancer Center; Veera Baladandayuthapani, UT MD Anderson Cancer Center
11:15 AM
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GLMM-Seq: Detection of Population-Based Gene Level Allele-Specific Expression by RNA-Seq
Jiaxin Fan, University of Pennsylvania; Jian Hu, University of Pennsylvania; Muredach Reilly, Columbia University; Rui Xiao, University of Pennsylvania; Mingyao Li, University of Pennsylvania
11:35 AM
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Genotype Prediction for All Publicly Available RNA-Seq Data
Siruo Wang, Johns Hopkins Bloomberg SPH; Jeffrey Leek, Johns Hopkins Bloomberg School of Public Health
11:50 AM
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Genetic Correlations Between Imaging Traits and Common Diseases
Hongyu Zhao, Yale
2:05 PM
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Using Omics Data to Guide Network Classification in Neuroimaging Studies of Brain Diseases
Jean Yee Hwa Yang, University of Sydney, Australia; Elizaveta Levina, University of Michigan; Mengbo Li, University of Sydney; Jesús Arroyo , University of Michigan; Daniel A. Kessler, University of Michigan
2:55 PM
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Thursday, 08/02/2018
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Bayesian Bi-Clustering Methods with Applications to Integrative Genomics and Genetics
Jun Liu, Harvard University; Yang Li, Vatic Labs; Jiexing Wu, Google
9:25 AM
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Single-Cell ATAC-Seq Signal Extraction and Enhancement
Hongkai Ji, Johns Hopkins Bloomberg School of Public Health; Zhicheng Ji, Johns Hopkins Bloomberg School of Public Health; Weiqiang Zhou, Johns Hopkins Bloomberg School of Public Health
10:35 AM
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Bayesian Reversible-Jump Sequential Variable Selection Methodology for High-Dimensional Arrays of Paired Predictors, with Application in Assessing Added-Value in Proteomics Data.
Bart Mertens, Leiden University Medical Centre; Alexia Kakourou, Leiden University Medical Centre
11:35 AM
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A Mixed-Effects Model for Powerful Association Tests in Integrative Functional Genomics
Yu-Ru Su, Fred Hutchinson Cancer Research Center; Li Hsu, Fred Hutchinson Cancer Research Center, USA; Chongzhi Di, Fred Hutchinson Cancer Research Center
11:35 AM
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Noise Modeling and Denoising of UMI-Based Single Cell RNA Sequencing Data
Nancy Zhang; Mo Huang, University of Pennsylvania; Mingyao Li, University of Pennsylvania; Jingshu Wang, University of Pennsylvania
11:35 AM
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Mitigating Test-Control Interference in Marketplace Experimentation
Duncan Gilchrist, Uber Technologies
11:55 AM
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