Keyword Search
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CC = Baltimore Convention Center, H = Hilton Baltimore
* = applied session ! = JSM meeting theme
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Keyword Search Criteria: Sequencing returned 38 record(s)
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Sunday, 07/30/2017
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Detecting Differential Gene Expression by Single-Cell RNA Sequencing
Mingyao R Li, University of Pennsylvania; Cheng Jia, University of Pennsylvania; Nancy Ruonan Zhang, Wharton School , University of Pennsylvania
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Nonparametric Bayes Multiresolution Testing for High-Dimensional Rare Events
Jyotishka Datta, University of Arkansas, Fayetteville; David Dunson, Duke University
2:45 PM
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DNA Seriation Under Planted Hamiltonian Path Model
Jiaming Xu, Purdue University
4:55 PM
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A Hidden Markov Model for Analyzing Allele-Specific Copy Number Alteration Accounting for Hypersegmentation in Next Generation Sequencing
Hyoyoung Choo-Wosoba, NIH/NCI-DCEG-Biostatistics Branch; Paul S. Albert, National Cancer Institute/NIH; Bin Zhu, NIH/NCI-DCEG-Biostatistics Branch
5:35 PM
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Monday, 07/31/2017
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Differential Network Analysis Based on Next Generation Sequencing Data
Tyler Grimes, University of Florida; Somnath Datta, University of Florida
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Biomarker Detection and Categorization in RNA-Seq Meta-Analysis Using Bayesian Hierarchical Model
Tianzhou Ma, Department of Biostatistics, University of Pittsburgh; Faming Liang, University of Florida; George Tseng, University of Pittsburgh
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Biomarker Detection and Categorization in RNA-Seq Meta-Analysis Using Bayesian Hierarchical Model
Tianzhou Ma, Department of Biostatistics, University of Pittsburgh; Faming Liang, University of Florida; George Tseng, University of Pittsburgh
8:40 AM
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Expression Recovery in Single Cell RNA Sequencing
Mo R Huang, University of Pennsylvania; Mingyao R Li, University of Pennsylvania; Nancy Ruonan Zhang, Wharton School , University of Pennsylvania
11:50 AM
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Tuesday, 08/01/2017
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PAIRADISE: Paired Analysis of Differential Isoform Expression from Replicate RNA-Seq Data
Levon Demirdjian, University of California Los Angeles; Shihao Shen, University of California Los Angeles; Ying Nian Wu, University of California Los Angeles; Yi Xing, University of California Los Angeles
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A Robust Estimator for Poisson Mean with Zero-Inflation and Contamination
Xiaotian Wu, Brown University; Yi Zhang, Brown University; Zhijin Wu, Brown University
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Using an Alternative Sequence for Teaching an Undergraduate Introductory Statistics
Phyllis Curtiss, Grand Valley State University; Robert Pearson, Grand Valley State University
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A Permutation-Based Non-Parametric Analysis of CRISPR Screen Data
Gaoxiang Jia, Southern Methodist University & UT Southwestern Medical Center; Xinlei Wang, Southern Methodist University; Guanghua Xiao, UT Southwestern Medical Center
10:35 AM
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BayesMP: a Bayesian Approach for Transcriptomic Meta-Analysis and Gene Module Detection
Chi Song; Zhiguang Huo, University of Pittsburgh; George Tseng, University of Pittsburgh
10:50 AM
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Using an Alternative Sequence for Teaching an Undergraduate Introductory Statistics
Phyllis Curtiss, Grand Valley State University; Robert Pearson, Grand Valley State University
10:50 AM
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Detecting Copy Number Variations via a Bayesian Approach Adapting to Both Whole Genome and Targeted Exome Sequencing
Yu-Chung Wei, Department of Statistics, Feng Chia University; Guan-Hua Huang, Institute of Statistics, National Chiao Tung University
11:05 AM
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Higher Resolution Metagenomics Methods and Their Implication for (Improved) Microbiome Analysis
Paul McMurdie, Whole Biome, Inc.
11:15 AM
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Gene Expression Variability and the Analysis of Large-Scale RNA-Seq Studies with the MDSeq
Z. John Daye, None; Di Ran, University of Arizona
11:20 AM
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Differential Abundance Analysis on Longitudinal Metagenomic Sequencing Data
Lingling An, University of Arizona; Dan Luo, University of Arizona
11:35 AM
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Missing Data and Technical Variability in Single-Cell RNA-Sequencing Experiments
Stephanie Hicks, Dana-Farber Cancer Institute/Harvard T.H. Chan School of Public Health; Mingxiang Teng, Dana-Farber Cancer Institute/Harvard T.H. Chan School of Public Health; F. William Townes, Harvard T.H. Chan School of Public Health; Rafael Irizarry, Harvard School of Public Health
2:20 PM
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Models for Microbial Community Population Structure
Curtis Huttenhower, Harvard T.H. Chan School of Public Health; Emma Schwager, Harvard School of Public Health; Boyu Ren, Harvard T.H. Chan School of Public Health; Eric A Franzosa, Harvard T.H. Chan School of Public Health
2:30 PM
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Computationally Efficient Rare Variant Association Testing in Multi-Ethnic Cohorts with Large-Scale Sequencing Data
Timothy Thornton, University of Washington
2:30 PM
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Number of Cells to Identify a Novel Subpopulation from a Single Cell RNA Sequencing
Kyung In Kim, Jackson Laboratory
2:35 PM
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Iteratively Adjusted Surrogate Variable Analysis (IA-SVA) Uncovers Hidden Heterogeneity in Bulk and Single Cell Transcriptomic Data
Donghyung Lee
2:50 PM
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Next Generation Analysis Tools for Single-Cell Functional Genomic Data
Weiqiang Zhou, Johns Hopkins University Bloomberg School of Public Health; Zhicheng Ji, Johns Hopkins University Bloomberg School of Public Health; Hongkai Ji, Johns Hopkins Bloomberg School of Public Health
3:05 PM
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Wednesday, 08/02/2017
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A Statistical Method for the Analysis of Multiple ChIP-Seq Data Sets
Pedro Luiz Baldoni, Univ of North Carolina At Chapel Hill; Naim Rashid, University of North Carolina at Chapel Hill; Joseph G Ibrahim, UNC
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Better Measurement of the Microbiome by Modeling and Removing Amplified Sequencing Errors
Benjamin John Callahan, North Carolina State University
8:35 AM
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Clustering Errored Sequence Reads to Estimate Unique Amplicons and Abundance
Karin Dorman, Iowa State University; Xiyu Peng, Iowa State University
8:55 AM
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Variant Call Differences Between Paired Reads in Illumina Amplicon Sequencing: An Issue for Rare Mutation Detection
Wei-Min Liu, Roche Molecular Systems Inc.; Julie Chen, UC Berkeley
9:20 AM
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Statistical Considerations in Clinical and Analytical Validations for Next Generation Sequencing Based GeneticTests
Jincao Wu, Food and Drug Administration; Meijuan Li, CDRH/FDA
9:35 AM
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A Statistical Method for the Analysis of Multiple ChIP-Seq Data Sets
Pedro Luiz Baldoni, Univ of North Carolina At Chapel Hill; Naim Rashid, University of North Carolina at Chapel Hill; Joseph G Ibrahim, UNC
9:35 AM
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Identification of Conditionally Essential Genes in Transposon Sequencing Studies
Lili Zhao, University of Michigan
9:50 AM
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Association Analysis Using Sequence Reads Without Calling Genotypes
Yijuan Hu, Emory University; Peizhou Liao, Department of Biostatistics and Bioinformatics, Emory; Henry Johnston, Department of Biostatistics and Bioinformatics, Emory; Andrew Allen, Department of Biostatistics and Bioinformatics, Duke; Glen Satten, Centers for Disease Control and Prevention
9:55 AM
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Detection of Signal Regions in Whole Genome Association Studies
Zilin Li; Xihong Lin, Harvard TH Chan School of Public Health
2:35 PM
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Thursday, 08/03/2017
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A Three-Groups Bayesian Approach to Identifying Beneficial and Deleterious Genes with Applications to Parkinson's Disease
Daisy Philtron, The Pennsylvania State University; Benjamin A Shaby, Penn State University
10:05 AM
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A Bayesian Hierarchical Model for Single-Cell RNA-Sequencing Data Clustering
Yiyi Liu, Yale University; Hongyu Zhao, Yale University
10:35 AM
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Accounting for Spatial Variation in Phenotype Distribution in Sequencing Studies with Natural Thin Plate Spline
Ye Ting Du, Harvard University; Han Chen, University of Texas Health Science Center at Houston; Xihong Lin, Harvard TH Chan School of Public Health
11:35 AM
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Wasserstein Distance Optimization Using the Brenier Map
Samson Koelle, UNIVERSITY OF WASHINGTON
11:35 AM
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Adaptive Testing of SNP-Brain Functional Connectivity Associations Using Modular Network Structures
Wei Pan, University of Minnesota
11:50 AM
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