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CC = Baltimore Convention Center, H = Hilton Baltimore
* = applied session ! = JSM meeting theme
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Keyword Search Criteria: RNA-seq returned 21 record(s)
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Monday, 07/31/2017
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Differential Network Analysis Based on Next Generation Sequencing Data
Tyler Grimes, University of Florida; Somnath Datta, University of Florida
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Biomarker Detection and Categorization in RNA-Seq Meta-Analysis Using Bayesian Hierarchical Model
Tianzhou Ma, Department of Biostatistics, University of Pittsburgh; Faming Liang, University of Florida; George Tseng, University of Pittsburgh
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Biomarker Detection and Categorization in RNA-Seq Meta-Analysis Using Bayesian Hierarchical Model
Tianzhou Ma, Department of Biostatistics, University of Pittsburgh; Faming Liang, University of Florida; George Tseng, University of Pittsburgh
8:40 AM
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Tuesday, 08/01/2017
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PAIRADISE: Paired Analysis of Differential Isoform Expression from Replicate RNA-Seq Data
Levon Demirdjian, University of California Los Angeles; Shihao Shen, University of California Los Angeles; Ying Nian Wu, University of California Los Angeles; Yi Xing, University of California Los Angeles
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An Empirical Bayes Approach for Differential Expression Analysis of RNA-Seq Data
Anqi Zhu; Michael Love, University of North Carolina Chapel Hill; Joseph G Ibrahim, UNC
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A Bayesian Approach to Analyzing Gene Expression in Heterogeneous Tissue Samples
Megan Stefanski, University of Missouri - Kansas City; David Spade, University of Missouri - Kansas City
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Slingshot: Cell Lineage and Pseudotime Inference for Single-Cell Transcriptomics
Kelly Street, Univ of California - Berkeley; David Risso, Department of Healthcare Policy and Research, Weill Cornell Medicine; Russell B. Fletcher, Department of Molecular and Cell Biology, UC Berkeley; Diya Das, Department of Molecular and Cell Biology, UC Berkeley; John Ngai, Department of Molecular and Cell Biology & Helen Wills Nenuroscience Institute, UC Berkeley; Nir Yosef, Department of Electrical Engineering and Computer Sciences, UC Berkeley; Elizabeth Purdom, Department of Statistics, UC Berkeley; Center for Computational Biology, UC Berkeley; Sandrine Dudoit, Division of Biostatistics, School of Public Health, UC Berkeley; Department of Statistics
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Gene Expression Variability and the Analysis of Large-Scale RNA-Seq Studies with the MDSeq
Z. John Daye, None; Di Ran, University of Arizona
11:20 AM
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Assessment of RNA-Seq Differential Expression Methods Based on TCGA Data
Guy Brock, Center for Biostatistics, The Ohio State University College of Medicine; Meredith McCormack-Mager, Center for Biostatistics, The Ohio State University College of Medicine; Yu Lianbo, Center for Biostatistics, The Ohio State University College of Medicine; Soledad Fernandez , Center for Biostatistics, The Ohio State University College of Medicine
11:35 AM
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Bayesian Analysis for Multi-Subject Time Course RNA-Seq Experiments
Allison Tegge, Virginia Tech; Shiqi Cui, Google; Marco Ferreira, Virginia Tech
11:50 AM
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Missing Data and Technical Variability in Single-Cell RNA-Sequencing Experiments
Stephanie Hicks, Dana-Farber Cancer Institute/Harvard T.H. Chan School of Public Health; Mingxiang Teng, Dana-Farber Cancer Institute/Harvard T.H. Chan School of Public Health; F. William Townes, Harvard T.H. Chan School of Public Health; Rafael Irizarry, Harvard School of Public Health
2:20 PM
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Extracting Insights from Genomic Data via Complex Interactive Heatmaps
Alicia Schep, Stanford School of Medicine
2:30 PM
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Iteratively Adjusted Surrogate Variable Analysis (IA-SVA) Uncovers Hidden Heterogeneity in Bulk and Single Cell Transcriptomic Data
Donghyung Lee
2:50 PM
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Wednesday, 08/02/2017
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Advances and Challenges of Single Cell RNA-Seq Data Analysis
Susmita Datta, University of Florida
8:55 AM
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Two-Step Mixed Model Approach to Analyzing Differential Alternative RNA Splicing
Li Luo, University of New Mexico Comprehensive Cancer Center; Huining Kang, University of New Mexico; Scott A. Ness, University of New Mexico Comprehensive Cancer Center; Christine A. Stidley, University of New Mexico
10:35 AM
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dtangle: a fast and accurate deconvolution estimator
Gregory Hunt, University of Michigan; Johann Gagnon-Bartsch, University of Michigan; Saskia Freytag, Walter and Eliza Hall Institute of Medical Research; Melanie Bahlo, Walter and Eliza Hall Institute of Medical Research
12:05 PM
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A Semi-parametric Bayesian Approach for Detection of Gene Expression Heterosis with RNA-Seq Data
Ran Bi, Iowa State University; Peng Liu, Iowa State University
2:35 PM
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