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CC = Baltimore Convention Center, H = Hilton Baltimore
* = applied session ! = JSM meeting theme
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Keyword Search Criteria: Genomics returned 37 record(s)
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Sunday, 07/30/2017
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A Phylogenetic Transform Enhances Analysis of Compositional Microbiota Data
Justin David Silverman, Duke University; Sayan Mukherjee, Duke University; Lawrence A David, Duke University
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Predicting Platinum Resistance in Ovarian Cancer Treatment from Integrated Genomic Data
Esther Drill, Memorial Sloan Kettering Cancer Center; Ronglai Shen, Memorial Sloan Kettering Cancer Center; Yuanjia Wang , Columbia University
2:05 PM
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Data Sharing for Validation of High-Throughput Chemical Screening Experiments of Cancer Cell Lines
Hongmei Liu, University of Miami; J. Sunil Rao, University of Miami
3:20 PM
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The Path from Big Data to Precision Medicine Is Paved with Statistics
Emma Huang, Janssen R&D; Hae Kyung Im, University of Chicago; Patrick Ryan, Janssen R&D; Haochang Shou, University of Pennsylvania; Vadim Zipunnikov, Johns Hopkins University; Michelle Dunn, National Institutes of Health
4:05 PM
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Evaluating the Statistical Significance of Genomic Lesions in Tumors
Stanley Pounds, St. Jude Children's Research Hospital; Xueyuan Cao, St. Jude Children's Research Hospital; Lei Shi, St. Jude Children's Research Hospital; Wenjian Bi, St. Jude Children's Research Hospital
4:35 PM
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Pan-cancer Analysis of Differential DNA Methylation Patterns
Mai Shi, The Chinese University of Hong Kong; Hao Wu, Emory University; Stephen Kwok-Wing Tsui, The Chinese University of Hong Kong; Yingying Wei, The Chinese University of Hong Kong
4:50 PM
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A Cautionary Note on the Validation Method for Molecular Classification Studies
Li-Xuan Qin, Memorial Sloan Kettering Cancer Center
4:55 PM
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Selective Inference in Genomics
Chiara Sabatti, Stanford University
4:55 PM
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An Integrative Genomics Approach to Infer Gene Expression Statistical Causal Network
Akram Yazdani, Icahn School of Medicine at Mount Sinai ; Azam Yazdani, The University of Texas School of Public Health, Houston; Panos Roussos, Icahn School of Medicine at Mount Sinai
5:05 PM
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A Hidden Markov Model for Analyzing Allele-Specific Copy Number Alteration Accounting for Hypersegmentation in Next Generation Sequencing
Hyoyoung Choo-Wosoba, NIH/NCI-DCEG-Biostatistics Branch; Paul S. Albert, National Cancer Institute/NIH; Bin Zhu, NIH/NCI-DCEG-Biostatistics Branch
5:35 PM
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Monday, 07/31/2017
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Empirical Bayes Learning from Co-Data in High-Dimensional Prediction Settings
Mark Van De Wiel, VU University medical center
9:35 AM
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Cancer Phylogenies and Nonparametric Clustering
Jeffrey Miller, Harvard School of Public Health; Scott Carter, Dana-Farber Cancer Institute
9:55 AM
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Composition Estimation from Sparse Count Data via a Regularized Likelihood
Hongzhe Li, University of Pennsylvania; Yuanpei Cao, University of Pennsylvania; Anru Zhang, University of Wisconsin-Madison
10:35 AM
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An Integrative Analysis of DNA Methylation and Copy Number Data for Biological Discovery
Jie Chen, Augusta University; Shirong Deng, Augusta University
11:35 AM
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Expression Recovery in Single Cell RNA Sequencing
Mo R Huang, University of Pennsylvania; Mingyao R Li, University of Pennsylvania; Nancy Ruonan Zhang, Wharton School , University of Pennsylvania
11:50 AM
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Metabolite Prediction in the Human Microbiome
Himel Mallick, Harvard University; Eric A. Franzosa, Harvard University; Lauren J. Mclver, Harvard University; Soumya Banerjee, University of Oxford; Alexandra Sirota-Madi, Evelo Biosciences; Aleksandar D. Kostic, Harvard University; Clary B. Clish, Broad Institute; Hera Vlamakis, Broad Institute; Ramnik Xavier, Massachusetts General Hospital; Curtis Huttenhower, Harvard T.H. Chan School of Public Health
2:05 PM
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A Powerful Learn-And-Confirm Pharmacogenomics Methodology for Randomized Clinical Trials
Devan Mehrotra, Merck & Co. Inc. ; Qian Guan, North Carolina State University; Zifang Guo, Merck & Co., Inc.
2:45 PM
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Tuesday, 08/01/2017
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Examination of Methods for Gene Expression Normalization in EQTL Studies
Sean McCabe, University of North Carolina at Chapel Hill; Danyu Lin, University of North Carolina; Michael Love, University of North Carolina Chapel Hill
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A Permutation-Based Non-Parametric Analysis of CRISPR Screen Data
Gaoxiang Jia, Southern Methodist University & UT Southwestern Medical Center; Xinlei Wang, Southern Methodist University; Guanghua Xiao, UT Southwestern Medical Center
10:35 AM
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Metagenomic Meta-Analysis of Large Data Sets: Tools and Biological Insights
Edoardo Pasolli, University of Trento, CIBIO
10:55 AM
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Higher Resolution Metagenomics Methods and Their Implication for (Improved) Microbiome Analysis
Paul McMurdie, Whole Biome, Inc.
11:15 AM
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Differential Abundance Analysis on Longitudinal Metagenomic Sequencing Data
Lingling An, University of Arizona; Dan Luo, University of Arizona
11:35 AM
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Extracting Insights from Genomic Data via Complex Interactive Heatmaps
Alicia Schep, Stanford School of Medicine
2:30 PM
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Interactive Visualization and Fast Computation of the Solution Path for Convex Clustering and Biclustering
John Nagorski, Rice University; Genevera I. Allen, Rice University
2:55 PM
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Integrative Association Analysis of Multiple Genomics Platforms
Danyu Lin, University of North Carolina
2:55 PM
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Identifiability and Inference of Causal Effects with High-Dimensional and Invalid Instruments
Changjing Wu, Peking University; Minghua Deng, Peking University; Wei Lin, Peking University
3:20 PM
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Integrating Multi-Omics Data to Identify Target Genes for Complex Traits Through a Gibbs Sampling Strategy
Bingshan Li, Vanderbilt University; Quan Wang, Vanderbilt University; Ying Ji, Vanderbilt University; Rui Chen, Vanderbilt University; Qiang Wei, Vanderbilt University; Xue Zhong, Vanderbilt University; Hai Yang, Vanderbilt University
3:20 PM
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Statistical Analysis of Single-Cell Chromatin Accessibility Data (ScATAC-Seq)
Peter Hickey, Johns Hopkins University; Kasper Hansen, Johns Hopkins Biostatistics
3:20 PM
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Wednesday, 08/02/2017
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Regulation of Cancer Testis Antigen Rich Whole Transcriptome Profiling of Ovarian Tumors
Kevin H Eng, Roswell Park Cancer Institute; Wenjun He, Roswell Park Cancer Institute; Kayla Morrell, Roswell Park Cancer Institute; Anthony Milliotto, Roswell Park Cancer Institute; Kunle Odunsi, Roswell Park Cancer Institute
8:35 AM
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Joint Modeling and Analysis of Microbiome with Other Omics Data
Michael C. Wu, Fred Hutchinson Cancer Research Center
9:00 AM
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Empirical Bayes Estimation of Gene Expression Fold Change
Abbas Rahal, University of Ottawa; Marta Padilla, University of Ottawa; David R. Bickel, University of Ottawa
10:50 AM
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Bayesian Variable Selection Over Large Scale Networks via the Thresholded Graph Laplacian Gaussian Prior with Application to Genomics
Qingpo Cai, Emory University-Rollins School of Public Health; Jian Kang, University of Michigan; Tianwei Yu, Emory University
11:55 AM
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On Sensitivity Value of Pair-Matched Observational Studies
Qingyuan Zhao, University of Pennsylvania
2:20 PM
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Integrating Imaging and Genomics
Arvind Rao, UT MDACC; Ganesh Rao, UT MDACC; Veera Baladandayuthapani, University of Texas MD Anderson Cancer Center; Michael Lehrer, UT MDACC; Donnie Kim, UT MDACC
2:35 PM
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Accounting for Tumor Purity Improves Cancer Subtype Classification from DNA Methylation Data
Hao Wu, Emory University
3:20 PM
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