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Sunday, 08/04/2013
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Next Generation of Genotype Imputation Methods
Sayantan Das, University of Michigan; Goncalo R. Abecasis, University of Michigan
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Handling Realistic Assumptions in Hypothesis Testing of 3D Co-Localization of Genomic Elements
Tonje Lien; Jonas Paulsen, Oslo University Hospital, Section for Medical Informatics, The Norwegian Radium Hospital; Geir Kjetil Sandve, University of Oslo, Department of Informatics; Lars Holden, Norwegian Computing Center; Ørnulf Borgan, University of Oslo, Department of Mathematics; Ingrid Glad, University of Oslo, Department of Mathematics; Eivind Hovig, Oslo University Hospital, Institute for Cancer Research, Department of Tumor Biology
4:35 PM
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Bi-Level Groupwise Multiple Features Selection Method for Identifying Novel Biomarkers in Pharmacogenetic Studies
Ting-Huei Chen, UNC at Chapel Hill; Wei Sun, UNC Chapel Hill
4:35 PM
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Mixed Modeling of Meta-Analysis P-Values (MixMAP) with Applications to Genome-Wide Association Studies of Low-Density Lipoprotein Cholesterol and Insulin Resistance
Gregory Matthews, University of Massachusetts; Andrea S. Foulkes, University of Massachusetts; Muredach Reilly, University of Pennsylvania School of Medicine
5:35 PM
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Monday, 08/05/2013
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Connecting the Layers of the Epigenome
Nicola Joy Armstrong, Garvan Institute of Medical Research
11:50 AM
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Statistical Analysis of Methylation Array Data
Brooke Fridley, University of Kansas Medical Center
2:05 PM
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Statistical Inference for Nonlinear Functional Models with Application to Copy Number Variation and Multiple Myeloma Data
Adrian Coles, North Carolina State University; Arnab Maity, North Carolina State University; Veera Baladandayuthapani, The University of Texas MD Anderson Cancer Center; Ganiraju Manyam, The University of Texas M.D. Anderson Cancer Center
2:20 PM
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Massively Parallel Sequencing of FIV Reveals Compartmental Differences Among Tissues in Dual and Single Infections
Yang Liu, The Pennsylvania State University; Francesca Chiaromonte, Penn State University; Howard Ross, University of Auckland; Daniel Elleder, The Pennsylvania State University; Mary Poss, The Pennsylvania State University
2:35 PM
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Tuesday, 08/06/2013
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Identifying Gene-Gene Interaction Using RNA-Sequencing Data
Kwang-Youn Kim, Northwestern University
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Adaptive Resistant Regression Method (ARM): A Better Alternative to Quantile Normalization for Methylation Data
Jean-Philippe Fortin, Department of Biostatistics, Johns Hopkins School of Public Health; Aurélie Labbe, Department of Epidemiology, Biostatistics and Occupational Health, McGill University; Celia M.T. Greenwood, Department of Epidemiology, Biostatistics and Occupational Health, McGill University; Mathieu Lemire, Ontario Institute of Cancer Research, Toronto, ON, Canada; Brent W. Zanke, Ottawa Hospital Research Institute; Thomas J. Hudson, Ontario Institute of Cancer Research, Toronto, ON, Canada
9:50 AM
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Detecting Master Regulators in Methylation QTL Studies
Jianxin Shi
9:50 AM
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SPReM: Sparse Projection Regression Model for High-Dimensional Linear Regression
Qiang Sun, The University of North Carolina-Chapel Hill; Hongtu Zhu, UNC-Chapel Hill; Yufeng Liu, The University of North Carolina; Joseph G. Ibrahim, The University of North Carolina at Chapel Hill
11:10 AM
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Functional Linear Models for Association Analysis of Quantitative Traits
Ruzong Fan, National Institutes of Health; Yifan Wang, National Institutes of Health; Momiao Xiong, The University of Texas; James L. Mills, NICHD, National Institutes of Health; Alexander F, Wilson, NHGRI, National Institutes of Health; Joan E. Bailey-Wilson, NHGRI, National Institutes of Health
11:20 AM
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Nonparametric Estimation of Phylogenetic Tree Distributions
Grady Weyenberg, University of Kentucky
3:20 PM
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Wednesday, 08/07/2013
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Association Mapping of Rare Variants in Samples with Related Individuals
Mary Sara McPeek, The University of Chicago; Duo Jiang, The University of Chicago
8:35 AM
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Common Themes in Statistical Bioinformatics Analyses
Rebecca W. Doerge, Purdue University
8:35 AM
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Assessing Parameter Identifiability in Phylogenetic Models Using Data Cloning
José Miguel Ponciano, University of Florida
9:15 AM
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Bayesian Methods to Identify Sequences with Species
G. Brian Golding, McMaster University
10:35 AM
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Latent Spatial Models for Landscape Genetics
Ephraim Hanks, Colorado State University; Mevin B. Hooten, U. S. Geological Survey, Colorado Cooperative Fish and Wildlife Research Unit
10:35 AM
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Phylogenetic bias in the likelihood method caused by missing data
Xuhua Xia, University of Ottawa
11:15 AM
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Integrative Modeling of Expression and Methylation Quantitative Trait Loci into Genetic Association Studies of Complex Diseases
Yen-Tsung Huang, Brown University
11:50 AM
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Paradigm of Genetic Risk Prediction: Variable Selection or Mixed Model
Peng Wei, Univeristy of Texas School of Public Health
3:25 PM
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Thursday, 08/08/2013
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Approximate Conditional Independence of Separated Subtrees and Phylogenetic Inference
Bret Larget, Univ of Wisconsin-Madison
8:55 AM
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An Integrative Bayesian Modeling Approach to Imaging Genetics
Francesco Stingo, UT MD Anderson Cancer Center; Michele Guindani, The University of Texas MD Anderson Cancer Center; Marina Vannucci, Rice University; Vince Calhoun, University of New Mexico
9:35 AM
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Integration of Encode Data to Understand the Regulatory Mechanism of Disease-Associated Variants Identified in GWAS
Dongjun Chung, Yale University; Hongyu Zhao, Yale University
9:35 AM
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A Phylogenetic Latent Liability Model for Assessing Correlations in Phenotype Evolution
Gabriela Cybis, UCLA; Janet Sinsheimer, UCLA; Philippe Lemey, KU Leuven; Marc A. Suchard, UCLA
9:35 AM
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Continuous Phylogeographic Diffusion with Drift
Mandev Gill, University of California, Los Angeles; Marc A. Suchard, UCLA
9:55 AM
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Statistical Models for High-Dimensional Compositional Data with Applicatins to Microbiome Data
Hongzhe Li, University of Pennsylvania
10:35 AM
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Linkage Disequilibrium-Based Subset Selection Approach for Rare Variants Analysis in Sequence Data
Sanjay Shete, The University of Texas, M. D. Anderson Cancer Center; Rajesh Talluri, UT M.D. Anderson Cancer Center
10:35 AM
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Inferring History of Evolution Using Massive Data of Single-Nucleotide Polymorphism
Yongliang Zhai, University of British Columbia; Alexandre Bouchard-Côté, University of British Columbia
10:50 AM
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Integrating Family-Specific Linkage Scores in Case-Control Tests of Association
Tasha E. Fingerlin, University of Colorado Anschutz Medical Campus; Anna L. Peljto, University of Colorado Anschutz Medical Campus; Sharon Lutz, Univ. of Colorado
11:50 AM
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